Commit f1210e0d authored by Malthe Kjær Bisbo's avatar Malthe Kjær Bisbo
Browse files

Initialized sphinx documentation with a few turorials + added hessian to gauss_kernel

parent b9ff7151
......@@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>Python Module Index &mdash; GOFEE documentation</title>
<title>gofee.candidate_operations package &mdash; GOFEE documentation</title>
......@@ -17,31 +17,24 @@
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......@@ -55,7 +48,7 @@
<a href="index.html" class="icon icon-home"> GOFEE
<a href="../index.html" class="icon icon-home"> GOFEE
......@@ -68,7 +61,7 @@
<div role="search">
<form id="rtd-search-form" class="wy-form" action="search.html" method="get">
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......@@ -85,10 +78,8 @@
<p class="caption"><span class="caption-text">Contents:</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="gofee.html">gofee package</a></li>
<li class="toctree-l1"><a class="reference internal" href="getting_started.html">GOFEE</a></li>
<ul>
<li class="toctree-l1"><a class="reference internal" href="../tutorial/tutorial.html">Tutorial</a></li>
</ul>
......@@ -103,7 +94,7 @@
<nav class="wy-nav-top" aria-label="top navigation">
<i data-toggle="wy-nav-top" class="fa fa-bars"></i>
<a href="index.html">GOFEE</a>
<a href="../index.html">GOFEE</a>
</nav>
......@@ -132,13 +123,17 @@
<ul class="wy-breadcrumbs">
<li><a href="index.html">Docs</a> &raquo;</li>
<li><a href="../index.html">Docs</a> &raquo;</li>
<li>Python Module Index</li>
<li>gofee.candidate_operations package</li>
<li class="wy-breadcrumbs-aside">
<a href="../_sources/old/gofee.candidate_operations.rst.txt" rel="nofollow"> View page source</a>
</li>
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......@@ -149,23 +144,21 @@
<div role="main" class="document" itemscope="itemscope" itemtype="http://schema.org/Article">
<div itemprop="articleBody">
<h1>Python Module Index</h1>
<div class="modindex-jumpbox">
<a href="#cap-g"><strong>g</strong></a>
</div>
<table class="indextable modindextable">
<tr class="pcap"><td></td><td>&#160;</td><td></td></tr>
<tr class="cap" id="cap-g"><td></td><td>
<strong>g</strong></td><td></td></tr>
<tr>
<td></td>
<td>
<a href="getting_started.html#module-gofee"><code class="xref">gofee</code></a></td><td>
<em>GOFEE</em></td></tr>
</table>
<div class="section" id="gofee-candidate-operations-package">
<h1>gofee.candidate_operations package<a class="headerlink" href="#gofee-candidate-operations-package" title="Permalink to this headline"></a></h1>
<div class="section" id="submodules">
<h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this headline"></a></h2>
</div>
<div class="section" id="gofee-candidate-operations-basic-mutations-module">
<h2>gofee.candidate_operations.basic_mutations module<a class="headerlink" href="#gofee-candidate-operations-basic-mutations-module" title="Permalink to this headline"></a></h2>
</div>
<div class="section" id="gofee-candidate-operations-candidate-generation-module">
<h2>gofee.candidate_operations.candidate_generation module<a class="headerlink" href="#gofee-candidate-operations-candidate-generation-module" title="Permalink to this headline"></a></h2>
</div>
<div class="section" id="module-contents">
<h2>Module contents<a class="headerlink" href="#module-contents" title="Permalink to this headline"></a></h2>
</div>
</div>
</div>
......
......@@ -17,26 +17,24 @@
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......@@ -50,7 +48,7 @@
<a href="index.html" class="icon icon-home"> GOFEE
<a href="../index.html" class="icon icon-home"> GOFEE
......@@ -63,7 +61,7 @@
<div role="search">
<form id="rtd-search-form" class="wy-form" action="search.html" method="get">
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<input type="hidden" name="check_keywords" value="yes" />
<input type="hidden" name="area" value="default" />
......@@ -80,25 +78,8 @@
<p class="caption"><span class="caption-text">Contents:</span></p>
<ul class="current">
<li class="toctree-l1 current"><a class="current reference internal" href="#">gofee package</a><ul>
<li class="toctree-l2"><a class="reference internal" href="#subpackages">Subpackages</a><ul>
<li class="toctree-l3"><a class="reference internal" href="gofee.candidate_operations.html">gofee.candidate_operations package</a></li>
<li class="toctree-l3"><a class="reference internal" href="gofee.surrogate.html">gofee.surrogate package</a></li>
</ul>
</li>
<li class="toctree-l2"><a class="reference internal" href="#submodules">Submodules</a></li>
<li class="toctree-l2"><a class="reference internal" href="#gofee-bfgslinesearch-constrained-module">gofee.bfgslinesearch_constrained module</a></li>
<li class="toctree-l2"><a class="reference internal" href="#gofee-bfgslinesearch-zlim-module">gofee.bfgslinesearch_zlim module</a></li>
<li class="toctree-l2"><a class="reference internal" href="#gofee-gofee-module">gofee.gofee module</a></li>
<li class="toctree-l2"><a class="reference internal" href="#gofee-parallel-utils-module">gofee.parallel_utils module</a></li>
<li class="toctree-l2"><a class="reference internal" href="#gofee-population-module">gofee.population module</a></li>
<li class="toctree-l2"><a class="reference internal" href="#gofee-utils-module">gofee.utils module</a></li>
<li class="toctree-l2"><a class="reference internal" href="#module-contents">Module contents</a></li>
</ul>
</li>
<li class="toctree-l1"><a class="reference internal" href="getting_started.html">GOFEE</a></li>
<ul>
<li class="toctree-l1"><a class="reference internal" href="../tutorial/tutorial.html">Tutorial</a></li>
</ul>
......@@ -113,7 +94,7 @@
<nav class="wy-nav-top" aria-label="top navigation">
<i data-toggle="wy-nav-top" class="fa fa-bars"></i>
<a href="index.html">GOFEE</a>
<a href="../index.html">GOFEE</a>
</nav>
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<li><a href="index.html">Docs</a> &raquo;</li>
<li><a href="modules.html">&lt;no title&gt;</a> &raquo;</li>
<li><a href="../index.html">Docs</a> &raquo;</li>
<li>gofee package</li>
......@@ -152,7 +131,7 @@
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<a href="_sources/gofee.rst.txt" rel="nofollow"> View page source</a>
<a href="../_sources/old/gofee.rst.txt" rel="nofollow"> View page source</a>
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......@@ -226,15 +205,6 @@
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<div class="rst-footer-buttons" role="navigation" aria-label="footer navigation">
<a href="gofee.candidate_operations.html" class="btn btn-neutral float-right" title="gofee.candidate_operations package" accesskey="n" rel="next">Next <span class="fa fa-arrow-circle-right"></span></a>
<a href="modules.html" class="btn btn-neutral float-left" title="&lt;no title&gt;" accesskey="p" rel="prev"><span class="fa fa-arrow-circle-left"></span> Previous</a>
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<link rel="next" title="GOFEE" href="getting_started.html" />
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......@@ -50,7 +48,7 @@
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<a href="../index.html" class="icon icon-home"> GOFEE
......@@ -63,7 +61,7 @@
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......@@ -80,37 +78,8 @@
<p class="caption"><span class="caption-text">Contents:</span></p>
<ul class="current">
<li class="toctree-l1 current"><a class="reference internal" href="gofee.html">gofee package</a><ul class="current">
<li class="toctree-l2 current"><a class="reference internal" href="gofee.html#subpackages">Subpackages</a><ul class="current">
<li class="toctree-l3"><a class="reference internal" href="gofee.candidate_operations.html">gofee.candidate_operations package</a></li>
<li class="toctree-l3 current"><a class="current reference internal" href="#">gofee.surrogate package</a><ul>
<li class="toctree-l4"><a class="reference internal" href="#submodules">Submodules</a></li>
<li class="toctree-l4"><a class="reference internal" href="#gofee-surrogate-custom-calculators-module">gofee.surrogate.custom_calculators module</a></li>
<li class="toctree-l4"><a class="reference internal" href="#gofee-surrogate-gpr-module">gofee.surrogate.gpr module</a></li>
<li class="toctree-l4"><a class="reference internal" href="#gofee-surrogate-gpr-calculator-module">gofee.surrogate.gpr_calculator module</a></li>
<li class="toctree-l4"><a class="reference internal" href="#gofee-surrogate-gpr-old-module">gofee.surrogate.gpr_old module</a></li>
<li class="toctree-l4"><a class="reference internal" href="#gofee-surrogate-kernel-module">gofee.surrogate.kernel module</a></li>
<li class="toctree-l4"><a class="reference internal" href="#gofee-surrogate-test-descriptor-module">gofee.surrogate.test_descriptor module</a></li>
<li class="toctree-l4"><a class="reference internal" href="#gofee-surrogate-test-gpr-module">gofee.surrogate.test_gpr module</a></li>
<li class="toctree-l4"><a class="reference internal" href="#gofee-surrogate-test-kernel-module">gofee.surrogate.test_kernel module</a></li>
<li class="toctree-l4"><a class="reference internal" href="#module-contents">Module contents</a></li>
</ul>
</li>
</ul>
</li>
<li class="toctree-l2"><a class="reference internal" href="gofee.html#submodules">Submodules</a></li>
<li class="toctree-l2"><a class="reference internal" href="gofee.html#gofee-bfgslinesearch-constrained-module">gofee.bfgslinesearch_constrained module</a></li>
<li class="toctree-l2"><a class="reference internal" href="gofee.html#gofee-bfgslinesearch-zlim-module">gofee.bfgslinesearch_zlim module</a></li>
<li class="toctree-l2"><a class="reference internal" href="gofee.html#gofee-gofee-module">gofee.gofee module</a></li>
<li class="toctree-l2"><a class="reference internal" href="gofee.html#gofee-parallel-utils-module">gofee.parallel_utils module</a></li>
<li class="toctree-l2"><a class="reference internal" href="gofee.html#gofee-population-module">gofee.population module</a></li>
<li class="toctree-l2"><a class="reference internal" href="gofee.html#gofee-utils-module">gofee.utils module</a></li>
<li class="toctree-l2"><a class="reference internal" href="gofee.html#module-contents">Module contents</a></li>
</ul>
</li>
<li class="toctree-l1"><a class="reference internal" href="getting_started.html">GOFEE</a></li>
<ul>
<li class="toctree-l1"><a class="reference internal" href="../tutorial/tutorial.html">Tutorial</a></li>
</ul>
......@@ -125,7 +94,7 @@
<nav class="wy-nav-top" aria-label="top navigation">
<i data-toggle="wy-nav-top" class="fa fa-bars"></i>
<a href="index.html">GOFEE</a>
<a href="../index.html">GOFEE</a>
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......@@ -154,11 +123,7 @@
<ul class="wy-breadcrumbs">
<li><a href="index.html">Docs</a> &raquo;</li>
<li><a href="modules.html">&lt;no title&gt;</a> &raquo;</li>
<li><a href="gofee.html">gofee package</a> &raquo;</li>
<li><a href="../index.html">Docs</a> &raquo;</li>
<li>gofee.surrogate package</li>
......@@ -166,7 +131,7 @@
<li class="wy-breadcrumbs-aside">
<a href="_sources/gofee.surrogate.rst.txt" rel="nofollow"> View page source</a>
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</div>
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<a href="getting_started.html" class="btn btn-neutral float-right" title="GOFEE" accesskey="n" rel="next">Next <span class="fa fa-arrow-circle-right"></span></a>
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......@@ -50,7 +48,7 @@
<a href="index.html" class="icon icon-home"> GOFEE
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......@@ -63,7 +61,7 @@
<div role="search">
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......@@ -80,10 +78,8 @@
<p class="caption"><span class="caption-text">Contents:</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="gofee.html">gofee package</a></li>
<li class="toctree-l1"><a class="reference internal" href="getting_started.html">GOFEE</a></li>
<ul>
<li class="toctree-l1"><a class="reference internal" href="../tutorial/tutorial.html">Tutorial</a></li>
</ul>
......@@ -98,7 +94,7 @@
<nav class="wy-nav-top" aria-label="top navigation">
<i data-toggle="wy-nav-top" class="fa fa-bars"></i>
<a href="index.html">GOFEE</a>
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</nav>
......@@ -127,7 +123,7 @@
<ul class="wy-breadcrumbs">
<li><a href="index.html">Docs</a> &raquo;</li>
<li><a href="../index.html">Docs</a> &raquo;</li>
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<li class="wy-breadcrumbs-aside">
<a href="_sources/modules.rst.txt" rel="nofollow"> View page source</a>
<a href="../_sources/old/modules.rst.txt" rel="nofollow"> View page source</a>
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<a href="gofee.html" class="btn btn-neutral float-right" title="gofee package" accesskey="n" rel="next">Next <span class="fa fa-arrow-circle-right"></span></a>
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......@@ -79,10 +79,8 @@
<p class="caption"><span class="caption-text">Contents:</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="gofee.html">gofee package</a></li>
<li class="toctree-l1"><a class="reference internal" href="getting_started.html">GOFEE</a></li>
<ul>
<li class="toctree-l1"><a class="reference internal" href="tutorial/tutorial.html">Tutorial</a></li>
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......
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