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Lars Dalby
almass
Commits
f285bf42
Commit
f285bf42
authored
Jan 29, 2019
by
LDalby
Browse files
Use map and unnest
parent
0d8193e9
Changes
1
Hide whitespace changes
Inline
Side-by-side
Grendel/collect-results-scenario_02.R
View file @
f285bf42
...
...
@@ -23,29 +23,37 @@ plan(multiprocess) # to run in parallel future_map in parallel.
suffix
<-
stringr
::
str_pad
(
as.character
(
1
:
npar
),
width
=
2
,
pad
=
"0"
)
path
(
path_to_dirs
,
glue
::
glue
(
"WD{suffix}"
),
"Results"
,
file_name
)
%>%
future_map
(
data.table
::
fread
)
%>%
data.table
::
rbindlist
()
%>%
data.table
::
setnames
(
c
(
"season"
,
"day"
,
"pinkfoot"
,
"pinkfoot_dist"
,
tibble
::
tibble
(
file_name
=
.
,
wd
=
glue
::
glue
(
"WD{suffix}"
))
%>%
dplyr
::
mutate
(
file_contents
=
future_map
(
file_name
,
~
data.table
::
fread
(
file
=
.
)))
%>%
tidyr
::
unnest
()
%>%
purrr
::
set_names
(
c
(
"file_name"
,
"wd"
,
"season"
,
"day"
,
"pinkfoot"
,
"pinkfoot_dist"
,
"barnacle"
,
"barnacle_dist"
,
"greylag"
,
"greylag_dist"
,
"grain"
,
"maize"
,
"polyref"
,
"param"
,
"value"
))
->
all_res
grain_file_name
<-
"scenario-grain-distributions.txt"
path
(
path_to_dirs
,
glue
::
glue
(
"WD{suffix}"
),
"Results"
,
grain_file_name
)
%>%
future_map
(
data.table
::
fread
)
%>%
data.table
::
rbindlist
()
%>%
data.table
::
setnames
(
c
(
"season"
,
"grain_dist"
,
"param"
,
"value"
))
->
all_grain
tibble
::
tibble
(
file_name
=
.
,
wd
=
glue
::
glue
(
"WD{suffix}"
))
%>%
dplyr
::
mutate
(
file_contents
=
future_map
(
file_name
,
~
data.table
::
fread
(
file
=
.
)))
%>%
tidyr
::
unnest
()
%>%
purrr
::
set_names
(
c
(
"season"
,
"grain_dist"
,
"param"
,
"value"
))
->
all_grain
rotation_file_name
<-
"scenario-rotations.txt"
path
(
path_to_dirs
,
glue
::
glue
(
"WD{suffix}"
),
rotation_file_name
)
%>%
future_map
(
data.table
::
fread
)
%>%
data.table
::
rbindlist
()
%>%
data.table
::
setnames
(
c
(
"wd"
,
"rotation"
))
->
all_rotation
tibble
::
tibble
(
file_name
=
.
,
wd
=
glue
::
glue
(
"WD{suffix}"
))
%>%
dplyr
::
mutate
(
file_contents
=
future_map
(
file_name
,
~
data.table
::
fread
(
file
=
.
)))
%>%
tidyr
::
unnest
()
%>%
purrr
::
set_names
(
c
(
"wd"
,
"rotation"
))
->
all_rotation
numbers_file_name
<-
"scenario-goose-numbers.txt"
path
(
path_to_dirs
,
glue
::
glue
(
"WD{suffix}"
),
"Results"
,
numbers_file_name
)
%>%
future_map
(
data.table
::
fread
)
%>%
data.table
::
rbindlist
()
%>%
data.table
::
setnames
(
c
(
"season"
,
"day"
,
"pf_families"
,
"pf_non_breeders"
,
"bn_families"
,
tibble
::
tibble
(
file_name
=
.
,
wd
=
glue
::
glue
(
"WD{suffix}"
))
%>%
dplyr
::
mutate
(
file_contents
=
future_map
(
file_name
,
~
data.table
::
fread
(
file
=
.
)))
%>%
tidyr
::
unnest
()
%>%
purrr
::
set_names
(
c
(
"season"
,
"day"
,
"pf_families"
,
"pf_non_breeders"
,
"bn_families"
,
"bn_non_breeders"
,
"gl_families"
,
"gl_non_breeders"
,
"snow_depth"
,
"param"
,
"value"
))
->
all_numbers
...
...
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